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| 1 | The Coix Genome Provides Insights into Panicoideae Evolution and Papery Hull Domestication显示文摘Coix is a grass crop domesticated as early as the Neolithic era.It is still widely cultivated for both highly nutritional food and medicinal use.However,the genetic study and breeding of this crop are hindered by the lack of a sequenced genome.Here,we report de novo sequencing and assembly of the 1619-Mb genome of Coix,and annotation of 75.39%repeats and 39629 protein-coding genes.Comparative genomics analysis showed that Coix is more closely related to sorghum than maize,but intriguingly only Coix and maize had a recent genome duplication event,which was not detected in sorghum.We further constructed a genetic map and mapped several important traits,especially the strength of hull.Selection of papery hull(thin:easy dehulling)from the stony hull(thick:difficult dehulling)in wild progenitors was a key step in Coix domestication.The papery hull makes seed easier to process and germinate.Anatomic and global transcriptome analysis revealed that the papery hull is a result of inhibition of cell division and wall biogenesis.We also successfully demonstrated that seed hull pressure resistance is controlled by two major quantitative trait loci(QTLs),which are associated with hull thickness and color,respectively.The two QTLs were further fine mapped within intervals of 250 kb and 146 kb,respectively.These resources provide a platform for evolutionary studies and will facilitate molecular breeding of this important crop. | Chao Guo Yanan Wang Aiguo Yang Jun He Chaowen Xiao Shanhua Lv Fengming Han Yibing Yuan Yuan Yuan Xiaolong Dong Juan Guo YawenYang-Hailan Liu Ningzhi Zuo Yaxi Hu Kangxu Zhao Zhengbo Jiang Xing Wang Tingting Jiang Yaou Sherf Moju Cao Yuan Wang Zhaobo Long Tingzhao Rong Luqi Huang Shufeng Zhou | 2020 | Molecular Plant2020，13，2： | 11 |
| 2 | Removal of cyanide adsorbed on pyrite by H_2O_2 oxidation under alkaline conditions显示文摘Large amounts of cyanide tailings are produced during the cyanidation process in gold extraction,which are hazardous solid wastes due to the toxic cyanide.Pyrite is one of the main minerals in cyanide tailings.The removal of cyanide adsorbed on pyrite by H_2O_2 oxidation under alkaline conditions was investigated in this study.It was found that the removal efficiency was positively correlated with pH from 5 to 12,but remained almost constant when pH was higher than 12.The highest cyanide removal efficiency of 91.10% was achieved by adding no less than 0.6 wt.% of H_2O_2.Cyanide removal was positively correlated with the CN^-adsorption amount between 1.06 and 8.5 mg/g,and temperature between 25 and 85°C.The removal of cyanide adsorbed on pyrite by H_2O_2 oxidation under alkaline conditions was due to the oxidation of pyrite.Hexacyanoferrate,thiocyanate and sulfate were generated with mole ratios of about 2.03:1.12:3.17 during the cyanide removal.?2018 The Research Center for Eco-Environmental Sciences,Chinese Academy of Sciences. | Yubo Tu Peiwei Han Lianqi Wei Xiaomeng Zhang Bo Yu Peng Qian Shufeng Ye | 2019 | Journal of Environmental Sciences2019，31，4： | 8 |
| 3 | Gene activation in human cells using CRISPR/ Cpf1-p300 and CRISPR/Cpf1-SunTag systems显示文摘 | Xin Zhang Wei Wang Lin Shan Le Han Shufeng Ma Yan Zhang Bingtao Hao Ying Lin Zhili Rong | 2018 | Protein & Cell2018，9，4： | 3 |
| 4 | Flooding and its relationship with land cover change, population growth, and road density显示文摘Bangladesh experiences frequent hydro-climatic disasters such as flooding.These disasters are believed to be associated with land use changes and climate variability.However,identifying the factors that lead to flooding is challenging.This study mapped flood susceptibility in the northeast region of Bangladesh using Bayesian regularization back propagation(BRBP)neural network,classification and regression trees(CART),a statistical model(STM)using the evidence belief function(EBF),and their ensemble models(EMs)for three time periods(2000,2014,and 2017).The accuracy of machine learning algorithms(MLAs),STM,and EMs were assessed by considering the area under the curve—receiver operating characteristic(AUC-ROC).Evaluation of the accuracy levels of the aforementioned algorithms revealed that EM4(BRBP-CART-EBF)outperformed(AUC>90%)standalone and other ensemble models for the three time periods analyzed.Furthermore,this study investigated the relationships among land cover change(LCC),population growth(PG),road density(RD),and relative change of flooding(RCF)areas for the period between 2000 and 2017.The results showed that areas with very high susceptibility to flooding increased by 19.72%between 2000 and 2017,while the PG rate increased by 51.68%over the same period.The Pearson correlation coefficient for RCF and RD was calculated to be 0.496.These findings highlight the significant association between floods and causative factors.The study findings could be valuable to policymakers and resource managers as they can lead to improvements in flood management and reduction in flood damage and risks. | Mahfuzur Rahman Chen Ningsheng Golam Iftekhar Mahmud Md Monirul Islam Hamid Reza Pourghasemi Hilal Ahmad Jules Maurice Habumugisha Rana Muhammad Ali Washakh Mehtab Alam Enlong Liu Zheng Han Huayong Ni Tian Shufeng Ashraf Dewan | 2021 | Geoscience Frontiers2021，12，6： | 3 |
| 5 | Confined-solution process for high-quality CH3NH3PbBr3 single crystals with controllable morphologies显示文摘 | Yitan Li Lu Han Qiao Liu Wei Wang Yuguang Chen Min Lyu Xuemei Li Hao Sun Hao Wang Shufeng Wang Yan Li | 2018 | Nano Research2018，11，6： | 2 |
| 6 | Impacts of space-time-frequency synchronization errors onwide-band target echo characteristics of bistatic/multistatic radar显示文摘Bistatic/multistatic radar has great potential advantages over its monostatic counterpart. However, the separation of a transmitter and a receiver leads to difficulties in locating the target position accurately and guaranteeing space-timefrequency synchronization of the transmitter and the receiver.The error model of space-time-frequency synchronization in a motion platform of bistatic/multistatic radar is studied. The relationship between the space synchronization error and the transmitter platform position, receiver platform position, moving state, and beam pointing error, is analyzed. The effect of space synchronization error on target echo power is studied. The target scattering characteristics are restructured by many separate scattering centers of the target in high frequency regions. Based on the scattering centers model of the radar target, this radar target echo model and the simulation method are discussed. The algorithm of bistatic/multistatic radar target echo accurately reflects the scattering characteristics of the radar target, pulse modulation speciality of radar transmitting signals, and spacetime-frequency synchronization error characteristics between the transmitter station and the receiver station. The simulation of bistatic radar is completed in computer, and the results of the simulation validate the feasibility of the method. | Minghai Pan Qinghua Han Shufeng Gong Weijun Long Haitao Wei | 2016 | Journal of Systems Engineering and Electronics2016，27，3： | 2 |
| 7 | Construction of Alkenyl-Functionalized Spirocarbocyclic Scaffolds from Alkyne-Containing Phenol-Based Biaryls via Sequential lodine-Induced Cyclization/Dearomatization and Pd-Catalyzed Coupling of N-Tosylhydrazones显示文摘of main obse rvation and conclusion An efficient strategy for the formation of alkenyl-functionalized spirocarbocyclic scaffolds from alkyne-containing phenol-based biaryls via sequential iodine-induced cyclization/dearomatization and Pd-catalyzed coupling of N-tosylhydrazones is developed.The approach provides various spirocarbocyclic compounds in moderate to excellent yields with good functional tolerance.The results also demonstrate the feasibility for the direct cross-couplings of N-tosyl hydrazones with sterically congested tetrasubstituted alkenyl halides. | Anjia Liu Kaiming Han Xin-Xing Wu Shufeng Chen Jianbo Wang | 2020 | Chinese Journal of Chemistry2020，38，11： | 1 |
| 8 | Agricultural machinery safety alert system using ultrasonic sensors显示文摘 | Guo Linsong Zhang Qin Han Shufeng | 2002 | Journal of Agricultural Safety and Health2002，8，4： | 1 |
| 9 | miR-124 and miR-128 differential expression in bone marrow stromal cells and spinal cord-derived neural stem cells显示文摘BACKGROUND: MicroRNA (miRNA) expression in stem cells provides important clues for the molecular mechanisms of stem cell proliferation and differentiation. Bone marrow stromal cells and spinal cord-derived neural stem cells exhibit potential for neural regeneration. However, miRNA expression in these cells has been rarely reported. OBJECTIVE: To explore differential expression of two nervous system-specific miRNAs, miR-124 and miR-128, in bone marrow stromal cells and spinal cord-derived neural stem cells. DESIGN, TIME AND SETTING: An In vitro, cell biology experiment was performed at the Department of Biotechnology, Shanxi Medical University from June 2008 to June 2009. MATERIALS: TaqMan miRNA assays were purchased from Applied Biosystems. METHODS: Rat bone marrow stromal cells were isolated and cultured using the whole-bone marrow method, and rat spinal cord-derived neural stem cells were obtained through neurosphere formation. TaqMan miRNA assays were used to measure miR-124 and miR-128 expression in bone marrow stromal cells and spinal cord-derived neural stem cells. MAIN OUTCOME MEASURES: Morphology of bone marrow stromal cells and spinal cord-derived neural stem cells were observed by inverted microscopy. Expression of the neural stem cell-specific marker, nestin, the bone marrow stromal cell surface marker, CD71, and expression of miR-124 and miR-128, were detected by real-time polymerase chain reaction. RESULTS: Cultured bone marrow stromal cells displayed a short fusiform shape. Flow cytometry revealed a large number of CD71-positive cells (> 95%). Cultured spinal cord-derived neural stem cells formed nestin-positive neurospheres, and quantitative detection of miRNA demonstrated that less miR-124 and miR-128 was expressed in bone marrow stromal cells compared to spinal cord-derived neural stem cells (P < 0.05). CONCLUSION: Bone marrow stromal cells and spinal cord-derived neural stem cells exhibited differential expression of miR-124 and miR-128, which suggested different characteristics in miRNA expression. | Chunfang Wang Hongen Wei Chuansen Zhang Pengfei Li Fei Wang Shufeng Han | 2010 | Neural Regeneration Research2010，5，11： | 1 |
| 10 | Overexpression ofphytoene synthase gene from Salicorniaeuropaea alters response to reactive oxygen species under salt stress in transgenic Arabidopsis显示文摘 | Han Heping Li Yinxin Zhou Shufeng | 2008 | Biotechnol Lett2008，30，8： | 1 |
| 11 | A genome wide association study between copy number variation (CNV) and human height in Chinese population显示文摘Copy number variation (CNV) is a type of genetic variation which may have important roles in phenotypic variability and disease susceptibility. To hunt for genetic variants underlying human height variation, we performed a genome wide CNV association study for human height in 618 Chinese unrelated subjects using Affymetrix 500K array set. After adjusting for age and sex, we found that four CNVs at 6p21.3, 8p23.3-23.2, 9p23 and 16p12.1 were associated with human height (with borderline significant p value: 0.013, 0.011, 0.024, 0.049; respectively). However, after multiple tests correction, none of them was associated with human height. We observed that the gain of copy number (more than 2 copies) at 8p23.3-23.2 was associated with lower height (normal copy number vs. gain of copy number: 161.2 cm vs. 153.7 cm, p = 0.011), which accounted for 0.9% of height variation. Loss of copy number (less than 2 copies) at 6p21.3 was associated with 0.8% lower height (loss of copy number vs. normal copy number: 154.5 cm vs. 161.1 cm, p = 0.013). Since no important genes influencing height located in CNVs at loci of 8p23.3-23.2 and 6p21.3, the two CNVs may cause the structural rear- rangements of neighbored important candidate genes, thus regulates the variation of height. Our results expand our knowledge of the genetic factors underlying height variation and the biological regulation of human height. | Xi Li Lijun Tan Xiaogang Liu Shufeng Lei Tielin Yang Xiangding Chen Fang Zhang Yue Fang Yan Guo Liang Zhang Han Yan Feng Pan Zhixin Zhang Yumei Peng Qi Zhou Lina He Xuezhen Zhu Jing Cheng Lishu Zhang Yaozhong Liu Qing Tian Hongwen Deng | 2010 | Journal of Genetics and Genomics2010，37，12： | 1 |
| 12 | Modification and testing of a commercial sprayer with PWM solenoids for precision spraying显示文摘 | Han Shufeng Hendrickson L L Ni Bingcheng | 2001 | Applied Engineering in Agriculture2001，17，5： | 1 |
| 13 | Agricultural machinery safety alert system using ultrasonic sensors显示文摘 | Guo Linsong Zhang Qin Han Shufeng | 2002 | Journal of Agricultural Safety and Health2002，8，4： | 1 |
| 14 | A Facile Construction of Bisheterocyclic Methane Scaffolds through Palladium-Catalyzed Domino Cyclization显示文摘Main observation and conclusion A convenient palladium-catalyzed domino cyclization reaction for the construction of bis(benzofuranyl)methane scaffolds bearing an all-carbon quaternary center has been described.In the cascade process,one C(sp2)—O bond,two C(sp2)—C(sp3)bonds as well as two benzofuran rings are formed in a single synthetic sequence.The approach shows wide scope of substrates and good functional-group tolerance.Moreover,this methodology is successfully extended to the synthesis of benzofuranyl methyl chromane derivatives. | Hongbo Qi Kaiming Han Shufeng Chen | 2021 | Chinese Journal of Chemistry2021，39，10： | 0 |
| 15 | Traumatic diaphragmatic hernia associated with pelvic fractures: a case report and literature review显示文摘Objective: To review the epidemiological feature, clinical, and diagnostic data of post-traumatic diaphragmatic hernia (TDH) associated with pelvic fractures patients reported in recent 10 years. Methods: One case of delayed presentation of TDH after pelvic fractures taken place one month later was present, with a review on the literature of this kind of patients in our country. Results: The incidence of TDH associated with pelvic fractures was relatively rare, and the diagnosis were often delayed or missed. Although the trans-thorax approach was preferred for surgical closure in the acute phase, its mortality was 8.51%. Conclusion: TDH associated with pelvic fractures is difficult to diagnose because of their varied clinical and radiological signs and the patients may not present with symptoms for a long time following the injury. In clinical, a high index of suspicion with appropriate examination is the mainstays of management, which can also increase the prognosis. | Dou Wu Qiang Liu Junchang Cheng Shufeng Han | 2005 | Journal of Nanjing Medical University2005，19，4： | 0 |
| 16 | Extraction of uranium (VI) from nitric acid with N-decanoylpyrrolidine (DPOD) in toluene显示文摘The extraction behaviors of uranium (VI) from nitric acid by N-decanoylpyrrolidine (DPOD) in toluene has been studied at varying concentrations of nitric acid, extractant, salting out agent LiNO3 and at different temperatures. The mechanism of extraction is discussed in the light of the results obtained. | HAN Jingtian SUN Guoxin BAO Borong (Shanghai Institute of Nuclear Research, the Chinese Academy of Sciences, Shanghai 201800) CHEN Shufeng SHEN Yunxiu (Binzhou Medical College, Binzhou 256603) | 1999 | Nuclear Science and Techniques1999，10，1： | 0 |
| 17 | Insights into the evolution and spatial chromosome architecture of jujube from an updated gapless genome assembly显示文摘Dear Editor,Jujube(Ziziphus jujuba Mill.),commonly called Chinese jujube,is a vital member of the Rhamnaceae family.It is famous for its tolerance to dry,barren,and saline-alkali soils,and its fruit has important nutritional and medicinal value.Recent fundamental research on jujube has involved assembly of draft genome sequences for the fresh-eating cultivar‘Dongzao’(Liu et al.,2014),dry-eating cultivar‘Junzao’(Huang et al.,2016),and wild sour jujube‘Suanzao’(Shen et al.,2021). | Meng Yang Lu Han Shufeng Zhang Li Dai Bin Li Shoukun Han Jin Zhao Ping Liu Zhihui Zhao Mengjun Liu | 2023 | Plant Communications2023，4，6： | 0 |
| 18 | Correction to: Gene activation in human cells using CRISPR/Cpf1-p300 and CRISPR/Cpf1- SunTag systems显示文摘In the original publication the Supplementary Material and Fig.2 are in correct.The correct versi on of Supplementary Material and Fig.2 are provided in this correction article.The text HBG2 appearing in the article should be read as HBG1. | Xin Zhang Wei Wang Lin Shan Le Han Shufeng Ma Yan Zhang Bingtao Hao Ying Lin Zhili Rong | 2019 | Protein & Cell2019，10，10： | 0 |
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