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| 1 | Next-generation sequencing in clinical virology: Discovery of new viruses显示文摘Viruses are a cause of significant health problem world-wide, especially in the developing nations. Due to different anthropological activities, human populations are exposed to different viral pathogens, many of which emerge as outbreaks. In such situations, discovery of novel viruses is utmost important for deciding prevention and treatment strategies. Since last century, a number of different virus discovery methods, based on cell culture inoculation, sequence-independent PCR have been used for identification of a variety of viruses. However, the recent emergence and commercial availability of nextgeneration sequencers(NGS) has entirely changed the field of virus discovery. These massively parallel sequencing platforms can sequence a mixture of genetic materials from a very heterogeneous mix, with high sensitivity. Moreover, these platforms work in a sequenceindependent manner, making them ideal tools for virus discovery. However, for their application in clinics, sample preparation or enrichment is necessary to detect low abundance virus populations. A number of techniques have also been developed for enrichment or viral nucleic acids. In this manuscript, we review the evolution of sequencing; NGS technologies available today as well as widely used virus enrichment technologies. We also discuss the challenges associated with their applications in the clinical virus discovery. | Sibnarayan Datta Raghvendra Budhauliya Bidisha Das Soumya Chatterjee Vanlalhmuaka Vijay Veer | 2015 | World Journal of Virology2015,4,3: | 5 |
| 2 | Credit Contagion Channels: Market Microstructure Evidence from Lehman Brothers’ Bankruptcy显示文摘 | Bidisha Chakrabarty Gaiyan Zhang | 2012 | Financial Management2012,,2: | 2 |
| 3 | Trichostatin - A induces differential changes in histone protein dynamics and expression in HeLa cells 显示文摘 | Jyothsna R Dipanjan B Bidisha B | 2007 | Biochem Biophys Res Commun2007,363,: | 1 |
| 4 | Muhivariate Short-term Traffic Flow Forecasting Using Time-series Analysis 显示文摘 | Bidisha Ghosh Biswajit Basu Margaret O'Mahony | 2009 | IEEE Transactions on Intelligent Transportation Systems2009,10,2: | 1 |
| 5 | Human Capital,Inequality,Endogenous Growth and Educational Subsidy:A Theoretical Analysis显示文摘 | Bidisha C Mansh R G | 2009 | Research in Economics2009,,63: | 1 |
| 6 | Time-Series Model for Short Term Traffic Flow Forecasting显示文摘 | Bidisha G Biswajit B Mahony Margaret Bayesian | 2007 | Journal of Transportation Engineering2007,133,3: | 1 |
| 7 | Multivariate short-term traffic flow forecasting usingtime-series analysis显示文摘 | Ghosh Bidisha Basu Biswajit O'Mahony Margaret | 2009 | IEEE Transactions on IntelligentTransportation Systems2009,10,2: | 1 |
| 8 | CrysXPP:An explainable property predictor for crystalline materials显示文摘We present a deep-learning framework,CrysXPP,to allow rapid and accurate prediction of electronic,magnetic,and elastic properties of a wide range of materials.CrysXPP lowers the need for large property tagged datasets by intelligently designing an autoencoder,CrysAE.The important structural and chemical properties captured by CrysAE from a large amount of available crystal graphs data helped in achieving low prediction errors.Moreover,we design a feature selector that helps to interpret the model’s prediction.Most notably,when given a small amount of experimental data,CrysXPP is consistently able to outperform conventional DFT.A detailed ablation study establishes the importance of different design steps.We release the large pre-trained model CrysAE.We believe by fine-tuning the model with a small amount of property-tagged data,researchers can achieve superior performance on various applications with a restricted data source. | Kishalay Das Bidisha Samanta Pawan Goyal Seung-Cheol Lee Satadeep Bhattacharjee Niloy Ganguly | 2022 | npj Computational Materials2022,,1: | 1 |
| 9 | Multivariatetraffic forecasting technique using cell transmissionmodel and SARIMA model显示文摘 | Szeto W Y Ghosh Bidisha Basu Biswajit | 2009 | Journal of TransportationEngineering2009,135,9: | 1 |
| 10 | Information transfers and learning in financial markets: Evidence from short selling around insider sales 显示文摘 | Bidisha C Andriy S | 2013 | Journal of Banking Finance2013,37,5: | 1 |
| 11 | Transcriptional activation of tyrosinase gene by human placental sphingolipid 显示文摘 | Bidisha Saha Suman Kumar Singh Chinmoy Sarkar | 2006 | Glycoconj J2006,,: | 1 |
| 12 | Sphingolipid - mediated restoration of Mitf expression and repigmentation in vivo in a mouse model of hair graying显示文摘 | Bidisha Saha Suman Kumar Singh Shampa Mallick | 2009 | Pigment Cell Melanoma Res2009,22,: | 1 |
| 13 | Price sur- charge and the effects of construal level显示文摘 | Albinsson P A Bidisha B Neel D | 2010 | Journal of Ap- plied Business and Economics2010,11,4: | 1 |
| 14 | Binding and antioxidant properties of therapeutically important plant flavonoids in biomembranes: Insights from spectroscopic and quantum chemical studies显示文摘 | Biswapathik Pahari Sandipan Chakraborty Sudip Chaudhuri Bidisha Sengupta Pradeep K. Sengupta | 2011 | Chemistry and Physics of Lipids2011,,4: | 1 |